Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885587.1_cds_XP_016439615.1_35156
CDS Infomation

[gene=LOC107765474] [db_xref=GeneID:107765474] [protein=cytochrome c biogenesis protein CCS1, chloroplastic-like] [protein_id=XP_016439615.1] [location=complement(join(72211..72414,72514..72597,72974..73130,73262..73350,73451..73687,74219..74330,74419..74599,75514..75886))] [gbkey=CDS]
Sequence

ATGGAAATGCTAAAATTTTCAACTAAACCTTTAAGAACACCCCATTTTCAAAATCATTTC
TGGGTTCCTCAAAATTCAAGAATTCTTGGTGTTTATAACAAAAAAGACCGCACTTTTTCA
TTTCCTCTTACTTGTAAGCTCAAGAATTCAAAAGGGAAGAAAAAGATTGTTCCTGGCAAT
ATTTCTTTGCCGGACTCCGGCGGAGCGCCGCCGCTTTTTGAGCGGAAGAAGGCGGCGGAA
GGAACCACTAGGAATAATAATGCGGATGGTAAAGTGGTGTTTAAGAAAGTGCCCAAAAGG
GTATTGGGAGTTCTCTCTAATTTGCCTTTGGTAATTGGTGAGATGTTTGCTGCTGCTGGC
TTAATGGCCTTAGGAACTATCATTGACAAAGGCGAGGTTCCAGAATTTTACTTTCAGAAT
TTTTCTGAATTTACCCTTGGCCTTGATCACATGTGCTCATCGCCTATTTTCCTGGGGTCG
CTGGCGATACTAGGTGCATCGTTGATGGCTTGCACAAACACAACACAAATTCCCCTTCTG
AAGGTAGCAAGAAGGCGGTCTTTCTTAAATTCAGCCGAGCCAATTCAAATGCAAGAAGAT
GCAGACACTCTGCCTAGAGCATCGGTTAAAGACTTGGATGTCACACCGATGGGAGCTGGA
TATGAGGTATTCTTTAAAGGGCCATCTCTTCATGCATTTAAGGGATTGGCAAGCCGATTT
GCTTCAACTGTAGTACATTTCGCGCTGCTGCTAGCAGTGTCTGGAGGAGGAACTCTCAGT
GCAGCAGACAGTTTTGGAGGGGATGTTATTGCACCGCCTGGGGTTCTATCGACTCCTTCT
GATGCTTTTAGTACTGAAGTTCATGTCAACCGATCCTACATGGACTATGACGAAAGTGGA
GAGACCTCACAGTTTCACACTGATATTTCCCTGACTGAACTTAATGGAAAGGAAGTACCG
AAGAAAACCACAAGTGTCAATGATCCCTTAAGATCAATACAAGCTGGTGATCTGCAATCA
ACTATTCTTAACGATAAAGAAGGGAAATTTGCTGGAGTTAAACAACCGAACTCAAAGCTT
CAAATTGAGATTGATGGAACAAAAATTGTCATTGTAGACGCAATTGGTAGTACTAGCCTG
GACCTAAAGACTGATCCAGGAGTACCAATAGTCTACGCTGGTTTTGGTTCTCTAATGCTT
ACAACTTGCATTAGTTATTTGTCACATGCACGGCTCTCAGACTTACAAGATGGAAAAACT
GAGGTGGCTGGTGGTAAGAATAATCGAGCCAAAGGCGAGTTTCCTGACACTGAGGATCGC
TTCCTCGATCAAGTCCCTGAGTTAGATGAATCATATTCTTCTACAGAGGAATCTGATAGT
TTCATTGGCTTCAGAATTCAAGTTGGAATTTGGAACAAGAAAGATTTTGATATGTAA

Peptide Sequence

PEP ID

XP_016439615.1
PEP Infomation

PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Nicotiana tabacum]
Sequence

MEMLKFSTKPLRTPHFQNHFWVPQNSRILGVYNKKDRTFSFPLTCKLKNSKGKKKIVPGN
ISLPDSGGAPPLFERKKAAEGTTRNNNADGKVVFKKVPKRVLGVLSNLPLVIGEMFAAAG
LMALGTIIDKGEVPEFYFQNFSEFTLGLDHMCSSPIFLGSLAILGASLMACTNTTQIPLL
KVARRRSFLNSAEPIQMQEDADTLPRASVKDLDVTPMGAGYEVFFKGPSLHAFKGLASRF
ASTVVHFALLLAVSGGGTLSAADSFGGDVIAPPGVLSTPSDAFSTEVHVNRSYMDYDESG
ETSQFHTDISLTELNGKEVPKKTTSVNDPLRSIQAGDLQSTILNDKEGKFAGVKQPNSKL
QIEIDGTKIVIVDAIGSTSLDLKTDPGVPIVYAGFGSLMLTTCISYLSHARLSDLQDGKT
EVAGGKNNRAKGEFPDTEDRFLDQVPELDESYSSTEESDSFIGFRIQVGIWNKKDFDM

Transcript Sequence

Gene sequence data has not been registered.